STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf507Zinc finger protein 507. (1030 aa)    
Predicted Functional Partners:
get4
Guided entry of tail-anchored proteins factor 4.
      
 0.858
PAQR9
Progestin and adipoQ receptor family member 9.
    
 
 0.812
ints5
Integrator complex subunit 5.
   
 
 0.810
dnajc11a
DnaJ (Hsp40) homolog, subfamily C, member 11a.
    
 
 0.792
dnajc11
DnaJ (Hsp40) homolog, subfamily C, member 11b.
    
 
 0.792
rnf152
E3 ubiquitin-protein ligase rnf152; E3 ubiquitin-protein ligase mediating 'Lys-63'-linked polyubiquitination of RRAGA in response to amino acid starvation. Thereby, regulates mTORC1 signaling and plays a role in the cellular response to amino acid availability. Also mediates 'Lys-48'-linked polyubiquitination of target proteins and their subsequent targeting to the proteasome for degradation; Belongs to the RNF152 family.
   
 
 0.751
ppp4r1
Protein phosphatase 4, regulatory subunit 1.
    
 
 0.569
nfybb
Nuclear transcription factor Y, beta b.
    
 
 0.548
ash1l
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 
 0.496
usf1l
Upstream transcription factor 2, c-fos interacting.
    
 
 0.493
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.