STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl9Oxysterol-binding protein; Belongs to the OSBP family. (733 aa)    
Predicted Functional Partners:
tor3a
Torsin family 3, member A.
 
    
 0.747
top1mt-2
DNA topoisomerase I mitochondrial.
   
 
 0.713
osbpl10b
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
0.676
osbpl11
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
0.669
osbpl7
Oxysterol-binding protein; Belongs to the OSBP family.
   
0.658
osbpl6
Oxysterol-binding protein; Belongs to the OSBP family.
   
0.656
osbpl3a
Oxysterol-binding protein; Belongs to the OSBP family.
   
0.656
vapb
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 
 0.650
LOC100334085
Oxysterol-binding protein; Belongs to the OSBP family.
    
  
0.637
gfm2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with mrrf. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
   
  
 0.588
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.