STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd1Coiled-coil-helix-coiled-coil-helix domain-containing 1. (113 aa)    
Predicted Functional Partners:
mrps16
Mitochondrial ribosomal protein S16.
   
  0.992
mrps24
28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family.
   
 0.987
mrps33
Mitochondrial ribosomal protein S33.
   
 0.985
mrps14
Novel protein similar to vertebrate mitochondrial ribosomal protein S14 (MRPS14, zgc:153664).
   
  0.985
mrps28
Mitochondrial ribosomal protein S28.
   
  0.984
mrps23
Mitochondrial ribosomal protein S23.
   
  0.984
mrps10
Probable 28S ribosomal protein S10, mitochondrial; Belongs to the universal ribosomal protein uS10 family.
   
  0.983
mrps17
Mitochondrial ribosomal protein S17.
   
 0.983
aurkaip1
Aurora kinase A-interacting protein 1.
   
 0.983
ptcd3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that may have a role in mitochondrial translation; Belongs to the mitochondrion-specific ribosomal protein mS39 family.
   
 0.982
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.