STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afap1l2Actin filament-associated protein 1-like 2. (859 aa)    
Predicted Functional Partners:
myct1b
Myc target 1b.
   
  
 0.841
LOC108179162
Si:zfos-2330d3.7.
   
  
 0.838
R4GEQ7_DANRE
Si:zfos-2330d3.7.
   
  
 0.838
R4GES4_DANRE
Si:ch1073-110a20.2.
   
  
 0.838
zgc:173915-2
Zgc:173915.
   
  
 0.838
LOC100334800
Fibrinogen C-terminal domain-containing protein.
   
  
 0.838
LOC566119
Fibrinogen C-terminal domain-containing protein.
   
  
 0.838
ENSDARP00000153811
Fibrinogen C-terminal domain-containing protein.
      
 0.833
glg1a
Golgi glycoprotein 1a.
      
 0.804
plekhj1
Pleckstrin homology domain-containing family J member 1.
    
 
 0.747
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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