STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sptan1Spectrin alpha, non-erythrocytic 1. (2480 aa)    
Predicted Functional Partners:
casp3a
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
 0.913
casp3b
Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.
   
 0.913
sptbn1
Spectrin beta chain; Belongs to the spectrin family.
   
0.897
ogg1
8-oxoguanine DNA glycosylase.
 
      0.874
LOC558044
Spectrin beta chain; Belongs to the spectrin family.
   
0.827
sptb
Spectrin beta chain; Belongs to the spectrin family.
   
0.827
sptbn5
Spectrin, beta, non-erythrocytic 5.
   
0.822
stxbp1a
Syntaxin-binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.762
ENSDARP00000142249
Si:zfos-1837d3.1.
 
 
 
 0.740
epb41l3a
Erythrocyte membrane protein band 4.1-like 3a.
   
 
 0.732
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.