STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uroc1Urocanate hydratase 1. (675 aa)    
Predicted Functional Partners:
hal
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
 
 0.987
AMDHD1
Probable imidazolonepropionase.
  
 
 0.981
ftcd
Formimidoyltransferase cyclodeaminase.
  
  
 0.925
F1QDE0_DANRE
Si:ch1073-100f3.2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.870
tha1
Threonine aldolase 1.
      
 0.851
ENSDARP00000141525
Si:ch1073-416d2.3; Belongs to the serpin family.
   
   0.820
slc5a9
Sodium/glucose cotransporter 4; Probable sodium-dependent sugar transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.745
slc2a11a
Solute carrier family 2 member 11a; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.679
csad
Cysteine sulfinic acid decarboxylase.
    
 
 0.672
atp5po
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit.
      
 0.646
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.