STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zranb2Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (314 aa)    
Predicted Functional Partners:
ly97.2
Cocaine-and amphetamine-regulated transcript protein-like 2.
      
 0.899
ly97.3
Cocaine-and amphetamine-regulated transcript protein-like 1.
      
 0.899
srek1
Splicing regulatory glutamine/lysine-rich protein 1.
   
 
 0.817
fosb
FBJ murine osteosarcoma viral oncogene homolog B.
   
  
 0.699
rpl32
Ribosomal protein L32.
      
 0.697
thpo
Thrombopoietin.
      
 0.670
kbtbd7
Kelch repeat and BTB (POZ) domain-containing 7.
      
 0.669
gtf2f1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
  
 0.625
sfswap
Splicing factor SWAP.
   
 
 0.617
ppan
Peter pan homolog.
   
  
 0.615
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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