STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgpl1Sphingosine-1-phosphate lyase 1. (572 aa)    
Predicted Functional Partners:
sgpp1
Sphingosine-1-phosphate phosphatase 1.
   
 0.990
sphk2
Sphingosine kinase 2.
  
 0.987
SPHK1
Sphingosine kinase 1.
 
 0.987
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.986
F1QK11_DANRE
Si:ch211-212g7.6.
    
 0.976
plpp2a
Phospholipid phosphatase 2a.
    
 0.935
plpp3
Phospholipid phosphatase 3.
    
 0.935
plpp2b
Phospholipid phosphatase 2b.
    
 0.935
LOC794598
acidPPc domain-containing protein.
    
 0.929
ppap2d
Phosphatidic acid phosphatase type 2D.
    
 0.927
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.