STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep112Centrosomal protein 112. (942 aa)    
Predicted Functional Partners:
ttc29
Tetratricopeptide repeat domain 29.
      
 0.752
Pmfbp1
Si:ch73-315f9.2.
   
  
 0.742
pmfbp1
Polyamine modulated factor 1-binding protein 1.
   
  
 0.742
tsga10
Testis-specific, 10.
   
 
 0.733
Ttc21a
Uncharacterized protein.
    
 
 0.669
Cfap61
Si:zfos-223e1.2.
      
 0.644
tacr1b
Tachykinin receptor 1b; Belongs to the G-protein coupled receptor 1 family.
      
 0.630
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.624
wipf3
Sb:cb649.
      
 0.619
cep131
Centrosomal protein of 131 kDa; Cilium-specific protein required for the regulation of cilium/flagellum formation. Involved in centriole duplication (By similarity). May play a role in melanosome trafficking ; Belongs to the CEP131 family.
   
 
 0.603
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.