STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnase2bDeoxyribonuclease II beta. (348 aa)    
Predicted Functional Partners:
dnase2
Deoxyribonuclease II, lysosomal.
  
  
 
0.906
dnase1l1l
Deoxyribonuclease; Belongs to the DNase I family.
      
 0.766
arl6ip5a
PRA1 family protein.
      
 0.650
E7FCP7_DANRE
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
      
 0.645
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
      
 0.644
carhsp1
Calcium-regulated heat stable protein 1.
      
 0.581
acsl4b
Acyl-CoA synthetase long chain family member 4b.
   
  
 0.559
acsl2
Acyl-CoA synthetase long chain family member 2.
   
  
 0.556
acsl1b
Acyl-CoA synthetase long chain family member 1b.
   
  
 0.548
acsl3a
Acyl-CoA synthetase long chain family member 3a.
   
  
 0.544
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.