STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1QKH0_DANRESi:ch211-1a19.2. (162 aa)    
Predicted Functional Partners:
cd79b
CD79b molecule, immunoglobulin-associated beta.
   
 0.695
cd79a
CD79a molecule, immunoglobulin-associated alpha.
   
 0.692
ighv1-4
Immunoglobulin heavy variable 1-4.
   
  0.644
ighv1-1
Immunoglobulin heavy variable 1-1.
   
  0.644
ighv8-3
Immunoglobulin heavy variable 8-3.
   
  0.644
ighv7-1
Immunoglobulin heavy variable 7-1.
   
  0.644
ighv5-2
Immunoglobulin heavy variable 5-2.
   
  0.644
ighv4-2
Immunoglobulin heavy variable 4-2.
   
  0.644
ighv10-1
Immunoglobulin heavy variable 10-1.
   
  0.644
ighv4-5-2
Immunoglobulin heavy variable 4-5.
   
  0.644
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.