Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cdr2a | sp2 | ENSDARP00000052178 | ENSDARP00000098588 | Cerebellar degeneration-related protein 2a. | Sp2 transcription factor. | 0.432 |
pcdh18a | sp2 | ENSDARP00000108171 | ENSDARP00000098588 | Protocadherin 18a. | Sp2 transcription factor. | 0.666 |
rp2 | sp2 | ENSDARP00000120363 | ENSDARP00000098588 | Protein XRP2; Acts as a GTPase-activating protein (GAP) involved in trafficking between the Golgi and the ciliary membrane (By similarity). Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization (By similarity). In the retina, required for maintenance of rod and cone photoreceptor cells. May have a role in normal retinal localization of the transducins GNB1 and GNAT1, and the rhodopsin kinase GRK1. | Sp2 transcription factor. | 0.414 |
sp2 | cdr2a | ENSDARP00000098588 | ENSDARP00000052178 | Sp2 transcription factor. | Cerebellar degeneration-related protein 2a. | 0.432 |
sp2 | pcdh18a | ENSDARP00000098588 | ENSDARP00000108171 | Sp2 transcription factor. | Protocadherin 18a. | 0.666 |
sp2 | rp2 | ENSDARP00000098588 | ENSDARP00000120363 | Sp2 transcription factor. | Protein XRP2; Acts as a GTPase-activating protein (GAP) involved in trafficking between the Golgi and the ciliary membrane (By similarity). Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization (By similarity). In the retina, required for maintenance of rod and cone photoreceptor cells. May have a role in normal retinal localization of the transducins GNB1 and GNAT1, and the rhodopsin kinase GRK1. | 0.414 |
sp2 | waca | ENSDARP00000098588 | ENSDARP00000073355 | Sp2 transcription factor. | WW domain-containing adapter protein with coiled-coil; Acts as a linker between gene transcription and histone H2B monoubiquitination at 'Lys-120' (H2BK120ub1). Positive regulator of amino acid starvation-induced autophagy. Positively regulates MTOR activity. May negatively regulate the ubiquitin proteasome pathway. | 0.464 |
waca | sp2 | ENSDARP00000073355 | ENSDARP00000098588 | WW domain-containing adapter protein with coiled-coil; Acts as a linker between gene transcription and histone H2B monoubiquitination at 'Lys-120' (H2BK120ub1). Positive regulator of amino acid starvation-induced autophagy. Positively regulates MTOR activity. May negatively regulate the ubiquitin proteasome pathway. | Sp2 transcription factor. | 0.464 |