STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpep2Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (425 aa)    
Predicted Functional Partners:
cndp2
Carnosine dipeptidase 2.
  
  
 0.762
dpep1
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
  
  
 
0.713
olfcq4
Olfactory receptor C family, q4.
      
 0.663
cox6b1
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
      
 0.639
wdr12
Ribosome biogenesis protein wdr12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
      
 0.606
ltc4s
Leukotriene C4 synthase.
      
 0.585
ano5b
Anoctamin.
      
 0.580
ggt5a
Gamma-glutamyltransferase 5a.
  
  
 0.565
E7F7Z9_DANRE
Si:dkey-100n23.5.
    
 
 0.541
exoc3l4
Exocyst complex component 3-like 4.
      
 0.541
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.