STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mturnMaturin; May be involved in early neuronal development (By similarity). May play a role in promoting megakaryocyte differentiation (By similarity). (133 aa)    
Predicted Functional Partners:
acp5a
Tartrate-resistant acid phosphatase type 5.
      
 0.577
aff3
AF4/FMR2 family, member 3.
      
 0.567
Lime1
Uncharacterized protein.
      
 0.563
upf3a
Regulator of nonsense transcripts 3A; Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC) and serving as link between the EJC core and NMD machinery. Recruits UPF2 at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. Binds spliced mRNA upstream of exon-exon junctions (By similarity); Belongs to the RENT3 family.
      
 0.557
topaz1
Testis and ovary-specific PAZ domain-containing 1.
      
 0.487
zgc:110796
Zgc:110796.
      
 0.475
msi1
Musashi RNA-binding protein 1.
      
 0.473
gpatch3
G patch domain-containing 3.
      
 0.444
capn7
Calpain 7; Belongs to the peptidase C2 family.
      
 0.416
efcab1
EF-hand calcium-binding domain 1.
      
 0.412
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.