STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhlha15Basic helix-loop-helix family, member a15. (184 aa)    
Predicted Functional Partners:
FADS6
Fatty acid desaturase 6.
      
 0.861
ZNF512B
Si:dkey-256k13.2.
    
 
 0.664
zfand3
Zinc finger, AN1-type domain 3.
      
 0.652
cpa1
Carboxypeptidase A1 (pancreatic).
      
 0.541
lmtk2
Lemur tyrosine kinase 2.
      
 0.520
iqgap3
IQ motif-containing GTPase-activating protein 3.
      
 0.480
trim55a
Tripartite motif-containing 55a.
      
 0.450
gart
Phosphoribosylglycinamide formyltransferase.
   
  
 0.440
pdx1
Pancreatic and duodenal homeobox 1.
   
  
 0.424
nkx6.1
NK6 homeobox 1.
   
  
 0.417
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.