STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts10ADAM metallopeptidase with thrombospondin type 1 motif, 10. (1108 aa)    
Predicted Functional Partners:
dennd6b
DENN/MADD domain-containing 6B.
      
 0.755
fbn2a
Fibrillin 2a.
    
 
 0.709
adamtsl4
PLAC domain-containing protein.
     
0.563
adamtsl3
ADAMTS-like 3.
     
0.559
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
0.554
lrp12
Low density lipoprotein receptor-related protein 12.
      
 0.540
adamts17
ADAM metallopeptidase with thrombospondin type 1 motif, 17.
     
0.521
asb10
Ankyrin repeat and SOCS box-containing 10.
      
 0.515
LOC101886422
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
     
0.512
atp6v1f
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.508
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.