STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrip2Nuclear receptor-interacting protein 2. (296 aa)    
Predicted Functional Partners:
tspan11
Tetraspanin.
      
 0.834
tspan9a
Tetraspanin.
   
  
 0.822
tspan9b
Tetraspanin-9.
      
 0.820
dyrk4
Dual-specificity tyrosine-(Y)-phosphorylation-regulated kinase 4.
      
 0.762
fkbp4
Peptidylprolyl isomerase.
      
 0.670
prmt8b
Protein arginine N-methyltransferase 8-B; S-adenosyl-L-methionine-dependent and membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. PRMT8 subfamily.
   
  
 0.665
PRMT8
Protein arginine methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.650
rad23ab
RAD23 homolog A, nucleotide excision repair protein b.
   
 
 0.611
rad23aa
RAD23 homolog A, nucleotide excision repair protein a.
   
 
 0.611
rad23b
RAD23 homolog B, nucleotide excision repair protein.
   
 
 0.611
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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