STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bY187G17.1-001Novel protein similar to zebrafish hemoglobin alpha-adult 1 (Hbaa1); Belongs to the globin family. (143 aa)    
Predicted Functional Partners:
hbbe2
Hemoglobin beta embryonic-2; Belongs to the globin family.
  
0.826
hbba1
Hemoglobin subunit beta-1; Involved in oxygen transport from gills to the various peripheral tissues; Belongs to the globin family.
  
0.803
hbbe3
Hemoglobin beta embryonic-3; Belongs to the globin family.
  
0.799
ba1l
Ba1 globin, like.
  
0.798
hbba2
Hemoglobin, beta adult 2; Belongs to the globin family.
  
0.795
rps26l
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
      
 0.770
hbbe1.3
Novel protein similar to zebrafish embryonic 1 beta-globin (BE1); Belongs to the globin family.
  
0.750
man2b2
Alpha-mannosidase.
      
 0.744
trim35-3
Tripartite motif-containing 35-3.
      
 0.743
hbbe1.2
Hemoglobin beta embryonic-1.2.
  
0.733
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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