Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C5H12orf49 | bmi1a | ENSDARP00000100969 | ENSDARP00000106943 | UPF0454 protein C12orf49 homolog. | Polycomb complex protein BMI-1-A; Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin- protein ligase activity of rnf2. | 0.482 |
C5H12orf49 | fam120b | ENSDARP00000100969 | ENSDARP00000049327 | UPF0454 protein C12orf49 homolog. | Family with sequence similarity 120B. | 0.416 |
C5H12orf49 | mbtps1 | ENSDARP00000100969 | ENSDARP00000007839 | UPF0454 protein C12orf49 homolog. | Membrane-bound transcription factor peptidase, site 1. | 0.582 |
C5H12orf49 | rabl3 | ENSDARP00000100969 | ENSDARP00000115081 | UPF0454 protein C12orf49 homolog. | Rab-like protein 3; Belongs to the small GTPase superfamily. Rab family. | 0.416 |
bmi1a | C5H12orf49 | ENSDARP00000106943 | ENSDARP00000100969 | Polycomb complex protein BMI-1-A; Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin- protein ligase activity of rnf2. | UPF0454 protein C12orf49 homolog. | 0.482 |
fam120b | C5H12orf49 | ENSDARP00000049327 | ENSDARP00000100969 | Family with sequence similarity 120B. | UPF0454 protein C12orf49 homolog. | 0.416 |
mbtps1 | C5H12orf49 | ENSDARP00000007839 | ENSDARP00000100969 | Membrane-bound transcription factor peptidase, site 1. | UPF0454 protein C12orf49 homolog. | 0.582 |
rabl3 | C5H12orf49 | ENSDARP00000115081 | ENSDARP00000100969 | Rab-like protein 3; Belongs to the small GTPase superfamily. Rab family. | UPF0454 protein C12orf49 homolog. | 0.416 |