STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf740a-2Zinc finger protein 740a. (72 aa)    
Predicted Functional Partners:
F1QD55_DANRE
Si:dkey-4c15.12.
  
     0.520
zgc:174222
Zgc:174222.
  
     0.467
znf1004
Zinc finger protein 1004.
  
     0.458
zgc:174564
Zgc:174564.
  
     0.451
B0S664_DANRE
Si:dkeyp-68b7.7.
  
     0.446
ENSDARP00000135364
Si:dkey-248e17.5.
  
     0.446
si:dkey-1b17.2
Si:dkey-1b17.2.
  
     0.437
zgc:113452
Zgc:113452.
  
     0.423
zgc:173548
Zgc:173548.
  
     0.421
U3JA68_DANRE
Si:dkey-66i24.9.
  
     0.418
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.