STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlgn2bNeuroligin 2b. (860 aa)    
Predicted Functional Partners:
nrxn1a
Neurexin-1a-beta; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May play a role in formation or maintenance of synaptic junctions; Belongs to the neurexin family.
   
 0.997
nrxn2a
Neurexin 2a.
   
 0.996
nrxn3a
Neurexin-3a.
   
 0.996
lrrc4ba
Leucine-rich repeat-containing 4Ba.
   
  
 0.652
NRXN2
Neurexin 2.
   
 
 0.633
dlg4
Disks large homolog 4; Plays a role in synapse assembly and function. Plays a role in synaptic plasticity.
    
 
 0.610
magi1b
Membrane-associated guanylate kinase, WW and PDZ domain-containing 1b.
    
 
 0.586
mdga2a
MAM domain-containing glycosylphosphatidylinositol anchor 2a.
   
 
 0.533
mdga1
MAM domain-containing glycosylphosphatidylinositol anchor 1.
   
 
 0.533
ENSDARP00000141230
MAM domain-containing protein.
   
 
 0.533
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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