Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dchs1b | fat4 | ENSDARP00000109139 | ENSDARP00000147985 | Dachsous cadherin-related 1b. | FAT atypical cadherin 4. | 0.572 |
dchs1b | fjx1 | ENSDARP00000109139 | ENSDARP00000154085 | Dachsous cadherin-related 1b. | Four-jointed box kinase 1. | 0.871 |
dchs1b | prickle2a | ENSDARP00000109139 | ENSDARP00000012600 | Dachsous cadherin-related 1b. | Prickle homolog 2a. | 0.518 |
dchs1b | vangl2 | ENSDARP00000109139 | ENSDARP00000031546 | Dachsous cadherin-related 1b. | Vang-like protein 2; Plays a role in non-canonical Wnt/planar cell polarity (PCP) signaling to regulate convergent extension cell movements during gastrulation. Acts together with scrib and prickle1 and localizes prickle1 and dvl2/dsh to the plasma membrane. Has an overlapping role with kny during both convergent extension and eye development. In the eye, involved in establishing proper alignment of the anterior neural plate and midline cells expressing shha and shhb/twhh. Has indirect effects on a number of other developmental processes including notochord shape formation, neural prog [...] | 0.474 |
fam20a | fjx1 | ENSDARP00000102347 | ENSDARP00000154085 | FAM20A golgi-associated secretory pathway pseudokinase. | Four-jointed box kinase 1. | 0.711 |
fam20a | gask1a | ENSDARP00000102347 | ENSDARP00000102764 | FAM20A golgi-associated secretory pathway pseudokinase. | Golgi-associated kinase 1A. | 0.822 |
fam20b | fjx1 | ENSDARP00000018976 | ENSDARP00000154085 | Glycosaminoglycan xylosylkinase; Responsible for the 2-O-phosphorylation of xylose in the glycosaminoglycan-protein linkage region of proteoglycans thereby regulating the amount of mature GAG chains. Sulfated glycosaminoglycans (GAGs), including heparan sulfate and chondroitin sulfate, are synthesized on the so-called common GAG-protein linkage region (GlcUAbeta1-3Galbeta1-3Galbeta1-4Xylbeta1-O-Ser) of core proteins, which is formed by the stepwise addition of monosaccharide residues by the respective specific glycosyltransferases (By similarity). Belongs to the FAM20 family. | Four-jointed box kinase 1. | 0.848 |
fam20b | gask1a | ENSDARP00000018976 | ENSDARP00000102764 | Glycosaminoglycan xylosylkinase; Responsible for the 2-O-phosphorylation of xylose in the glycosaminoglycan-protein linkage region of proteoglycans thereby regulating the amount of mature GAG chains. Sulfated glycosaminoglycans (GAGs), including heparan sulfate and chondroitin sulfate, are synthesized on the so-called common GAG-protein linkage region (GlcUAbeta1-3Galbeta1-3Galbeta1-4Xylbeta1-O-Ser) of core proteins, which is formed by the stepwise addition of monosaccharide residues by the respective specific glycosyltransferases (By similarity). Belongs to the FAM20 family. | Golgi-associated kinase 1A. | 0.874 |
fat1a | fat4 | ENSDARP00000112805 | ENSDARP00000147985 | FAT atypical cadherin 1a. | FAT atypical cadherin 4. | 0.439 |
fat1a | fjx1 | ENSDARP00000112805 | ENSDARP00000154085 | FAT atypical cadherin 1a. | Four-jointed box kinase 1. | 0.905 |
fat2 | fat4 | ENSDARP00000014029 | ENSDARP00000147985 | FAT atypical cadherin 2. | FAT atypical cadherin 4. | 0.446 |
fat2 | fjx1 | ENSDARP00000014029 | ENSDARP00000154085 | FAT atypical cadherin 2. | Four-jointed box kinase 1. | 0.633 |
fat3a | fjx1 | ENSDARP00000150399 | ENSDARP00000154085 | FAT atypical cadherin 3a. | Four-jointed box kinase 1. | 0.852 |
fat4 | dchs1b | ENSDARP00000147985 | ENSDARP00000109139 | FAT atypical cadherin 4. | Dachsous cadherin-related 1b. | 0.572 |
fat4 | fat1a | ENSDARP00000147985 | ENSDARP00000112805 | FAT atypical cadherin 4. | FAT atypical cadherin 1a. | 0.439 |
fat4 | fat2 | ENSDARP00000147985 | ENSDARP00000014029 | FAT atypical cadherin 4. | FAT atypical cadherin 2. | 0.446 |
fat4 | fjx1 | ENSDARP00000147985 | ENSDARP00000154085 | FAT atypical cadherin 4. | Four-jointed box kinase 1. | 0.868 |
fat4 | prickle2a | ENSDARP00000147985 | ENSDARP00000012600 | FAT atypical cadherin 4. | Prickle homolog 2a. | 0.511 |
fat4 | vangl2 | ENSDARP00000147985 | ENSDARP00000031546 | FAT atypical cadherin 4. | Vang-like protein 2; Plays a role in non-canonical Wnt/planar cell polarity (PCP) signaling to regulate convergent extension cell movements during gastrulation. Acts together with scrib and prickle1 and localizes prickle1 and dvl2/dsh to the plasma membrane. Has an overlapping role with kny during both convergent extension and eye development. In the eye, involved in establishing proper alignment of the anterior neural plate and midline cells expressing shha and shhb/twhh. Has indirect effects on a number of other developmental processes including notochord shape formation, neural prog [...] | 0.810 |
fjx1 | dchs1b | ENSDARP00000154085 | ENSDARP00000109139 | Four-jointed box kinase 1. | Dachsous cadherin-related 1b. | 0.871 |
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