STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnj16Potassium inwardly rectifying channel subfamily J member 16. (321 aa)    
Predicted Functional Partners:
kcnj10a
Potassium inwardly rectifying channel subfamily J member 10a.
  
0.947
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
  
0.946
ccdc137
Coiled-coil domain-containing 137.
      
 0.807
bsnd
Barttin CLCNK-type chloride channel accessory beta subunit.
      
 0.740
ano10b
Anoctamin.
      
 0.670
kcnj1a.1
Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 1.
  
 
0.620
kcnj1b
Potassium inwardly rectifying channel subfamily J member 1b.
  
 
0.619
gng13b
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.601
ttyh2
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
      
 0.586
kcnk1a
Potassium channel subfamily K member.
   
  
 0.580
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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