STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp2r5cbSerine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (578 aa)    
Predicted Functional Partners:
ppp2r1bb
Protein phosphatase 2 (Formerly 2A), regulatory subunit A, beta isoform.
   
 0.962
ppp2r1ba
Protein phosphatase 2, regulatory subunit A, beta a.
   
 0.934
ppp2ca
Serine/threonine-protein phosphatase.
   
 0.929
zgc:56064
Serine/threonine-protein phosphatase.
    
 0.918
ppp2cb
Serine/threonine-protein phosphatase.
    
 0.918
bub1ba
BUB1 mitotic checkpoint serine/threonine kinase Ba.
    
 0.795
phf20l1
PHD finger protein 20-like 1.
   
  
 0.748
lman2la
Lectin, mannose-binding 2-like a.
      
 0.744
calhm6
Calcium homeostasis modulator family member 6.
      
 0.743
slc25a47a
Solute carrier family 25 member 47-A.
      
 0.742
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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