Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| UBB | otud5a | ENSDARP00000030819 | ENSDARP00000114334 | Si:ch211-202a12.4. | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | 0.521 |
| UBB | otud5b | ENSDARP00000030819 | ENSDARP00000105205 | Si:ch211-202a12.4. | OTU deubiquitinase 5b. | 0.521 |
| UBB | rps27a | ENSDARP00000030819 | ENSDARP00000128775 | Si:ch211-202a12.4. | Ribosomal protein S27a. | 0.987 |
| UBB | uba52 | ENSDARP00000030819 | ENSDARP00000060744 | Si:ch211-202a12.4. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.988 |
| UBB | ubb | ENSDARP00000030819 | ENSDARP00000140603 | Si:ch211-202a12.4. | Ubiquitin B. | 0.937 |
| UBB | ubc | ENSDARP00000030819 | ENSDARP00000139647 | Si:ch211-202a12.4. | Ubiquitin C. | 0.937 |
| UBB | zgc:194655 | ENSDARP00000030819 | ENSDARP00000130395 | Si:ch211-202a12.4. | Zgc:194655. | 0.518 |
| atg3 | otud5a | ENSDARP00000041303 | ENSDARP00000114334 | Ubiquitin-like-conjugating enzyme ATG3; E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C- terminal Gly of atg8-like proteins (gabarap, gabarapl1, gabarapl2 or map1lc3a). The atg12-atg5 conjugate plays a role of an E3 and promotes the transfer of atg8-like proteins from atg3 to phosphatidylethanolamine (PE). This step is required for the membrane association of atg8-like proteins. The formation of the atg8- phosphatidylethanolamine conju [...] | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | 0.478 |
| atg3 | otud5b | ENSDARP00000041303 | ENSDARP00000105205 | Ubiquitin-like-conjugating enzyme ATG3; E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C- terminal Gly of atg8-like proteins (gabarap, gabarapl1, gabarapl2 or map1lc3a). The atg12-atg5 conjugate plays a role of an E3 and promotes the transfer of atg8-like proteins from atg3 to phosphatidylethanolamine (PE). This step is required for the membrane association of atg8-like proteins. The formation of the atg8- phosphatidylethanolamine conju [...] | OTU deubiquitinase 5b. | 0.486 |
| otud5a | UBB | ENSDARP00000114334 | ENSDARP00000030819 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Si:ch211-202a12.4. | 0.521 |
| otud5a | atg3 | ENSDARP00000114334 | ENSDARP00000041303 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Ubiquitin-like-conjugating enzyme ATG3; E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C- terminal Gly of atg8-like proteins (gabarap, gabarapl1, gabarapl2 or map1lc3a). The atg12-atg5 conjugate plays a role of an E3 and promotes the transfer of atg8-like proteins from atg3 to phosphatidylethanolamine (PE). This step is required for the membrane association of atg8-like proteins. The formation of the atg8- phosphatidylethanolamine conju [...] | 0.478 |
| otud5a | otud5b | ENSDARP00000114334 | ENSDARP00000105205 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | OTU deubiquitinase 5b. | 0.903 |
| otud5a | rps27a | ENSDARP00000114334 | ENSDARP00000128775 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Ribosomal protein S27a. | 0.773 |
| otud5a | sart1 | ENSDARP00000114334 | ENSDARP00000002453 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Spliceosome-associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.616 |
| otud5a | traf3 | ENSDARP00000114334 | ENSDARP00000038596 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.952 |
| otud5a | uba52 | ENSDARP00000114334 | ENSDARP00000060744 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.699 |
| otud5a | ubb | ENSDARP00000114334 | ENSDARP00000140603 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Ubiquitin B. | 0.597 |
| otud5a | ubc | ENSDARP00000114334 | ENSDARP00000139647 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Ubiquitin C. | 0.536 |
| otud5a | zgc:194655 | ENSDARP00000114334 | ENSDARP00000130395 | OTU domain-containing protein 5-A; Deubiquitinating enzyme that may function as negative regulator of the innate immune system. Has peptidase activity towards 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Can also cleave 'Lys-11'-linked ubiquitin chains (in vitro) (By similarity). | Zgc:194655. | 0.485 |
| otud5b | UBB | ENSDARP00000105205 | ENSDARP00000030819 | OTU deubiquitinase 5b. | Si:ch211-202a12.4. | 0.521 |
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