STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmasbN-acylneuraminate cytidylyltransferase B; Catalyzes the activation of 2-keto-3-deoxy-D-glycero-D- galacto-nononic acid (KDN) to cytidine 5'-monophosphate 2-keto-3-deoxy- D-glycero-D-galacto-nononic acid (CMP-KDN), a substrate required for the addition of sialic acid. Also has weak activity towards N- acetylneuraminic acid (NeuNAc) and N-glycolylneuraminic acid (Neu5Gc). Belongs to the CMP-NeuNAc synthase family. (423 aa)    
Predicted Functional Partners:
neu3.5
Sialidase 3 (membrane sialidase), tandem duplicate 5.
   
 
 0.879
st6galnac
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 
 0.839
st8sia5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
    
 
 0.836
neu1
Novel protein similar to vertebrate sialidase 1 (Lysosomal sialidase) (NEU1).
      
 0.781
neu4
Neu4 protein.
   
 
 0.779
st3gal3a
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a; Belongs to the glycosyltransferase 29 family.
    
 
 0.741
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
    
 
 0.730
st6gal2b
ST6 beta-galactosamide alpha-2,6-sialyltranferase 2b; Belongs to the glycosyltransferase 29 family.
    
 
 0.721
st3gal7
ST3 beta-galactoside alpha-2,3-sialyltransferase 7; Belongs to the glycosyltransferase 29 family.
    
 
 0.682
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
    
 
 0.681
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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