STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribc2RIB43A domain with coiled-coils 2. (367 aa)    
Predicted Functional Partners:
tekt2
Tektin 2 (testicular).
   
 
 0.694
tekt3
Tektin 3.
   
 
 0.684
ccdc114
Coiled-coil domain-containing 114.
   
 
 0.649
cfap45
Cilia and flagella-associated protein 45.
  
 
 0.640
efhc1
EF-hand domain (C-terminal)-containing 1.
   
 
 0.627
B8JK25_DANRE
Si:dkey-256e7.5.
   
 
 0.625
mns1
Meiosis-specific nuclear structural protein 1.
    
 
 0.610
armc4
Armadillo repeat-containing 4.
   
 
 0.609
efhc2
EF-hand domain-containing family member C2.
   
 
 0.600
pacrg
PARK2 co-regulated.
   
 
 0.592
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.