STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robo2Roundabout, axon guidance receptor, homolog 2 (Drosophila). (1387 aa)    
Predicted Functional Partners:
slit1a
Slit homolog 1a (Drosophila).
   
 
 0.998
slit1b
Slit homolog 1b (Drosophila).
   
 
 0.997
slit2
Slit homolog 2 (Drosophila).
   
 
 0.988
zgc:77784
Zgc:77784.
 
     
0.899
robo2-2
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
 
     
0.899
slit3
Slit homolog 3 (Drosophila).
   
 
 0.892
ntn1a
Netrin-1a.
   
  
 0.789
ntn1b
Netrin 1b.
   
  
 0.768
ntn2
Netrin 2.
   
  
 0.751
nyx
Nyctalopin.
   
 
 0.634
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.