STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pibf1Progesterone immunomodulatory-binding factor 1. (752 aa)    
Predicted Functional Partners:
fopnl
Fgfr1op N-terminal-like.
   
 
 0.617
txndc12
Thioredoxin domain-containing 12 (endoplasmic reticulum).
    
 
 0.612
MZT1
Mitotic-spindle organizing protein 1; Required for gamma-tubulin complex recruitment to the centrosome.
    
 
 0.596
tbc1d31
TBC1 domain family, member 31.
   
 
 0.585
bora
Protein aurora borealis; Required for the activation of aurka at the onset of mitosis.
   
 
 0.583
madd
MAP-kinase-activating death domain.
      
 0.574
ttll10
Tubulin tyrosine ligase-like family, member 10.
    
 
 0.566
ttll5
Tubulin tyrosine ligase-like family, member 5.
    
 
 0.566
crtam
Ig-like domain-containing protein.
      
 0.565
akna
AT-hook transcription factor.
      
 0.564
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.