STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apoa4b.1Apolipoprotein A-IV b, tandem duplicate 1. (255 aa)    
Predicted Functional Partners:
apobb.1
Apolipoprotein Bb, tandem duplicate 1.
   
 
 0.962
apoba
Apolipoprotein Ba.
   
 
 0.884
apobb.2
Apolipoprotein Bb, tandem duplicate 2.
   
 
 0.841
apoa2
Apolipoprotein A-II.
   
  
 0.829
apoc1
Apolipoprotein C-I.
   
 
 0.827
fabp1b.1
Fatty acid binding protein 1-B.1; Binds free fatty acids and their coenzyme A derivatives, bilirubin, and some other small molecules in the cytoplasm. May be involved in intracellular lipid transport (By similarity). Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.757
pla2g12b
Phospholipase A2, group XIIB.
   
 
 0.748
lcat
Lecithin-cholesterol acyltransferase.
   
 
 0.690
apom
Apolipoprotein M.
   
  
 0.688
apoc2
Apolipoprotein C-II.
   
  
 0.681
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.