Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC100534805 | cox10 | ENSDARP00000140986 | ENSDARP00000048926 | Translational activator of mitochondrially encoded cytochrome c oxidase I. | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | 0.757 |
| LOC100534805 | lrpprc | ENSDARP00000140986 | ENSDARP00000111776 | Translational activator of mitochondrially encoded cytochrome c oxidase I. | Leucine-rich pentatricopeptide repeat-containing. | 0.734 |
| cox10 | LOC100534805 | ENSDARP00000048926 | ENSDARP00000140986 | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | Translational activator of mitochondrially encoded cytochrome c oxidase I. | 0.757 |
| cox10 | lrpprc | ENSDARP00000048926 | ENSDARP00000111776 | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | Leucine-rich pentatricopeptide repeat-containing. | 0.662 |
| cox10 | taco1 | ENSDARP00000048926 | ENSDARP00000117391 | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | Translational activator of mitochondrially encoded cytochrome c oxidase I. | 0.757 |
| eprs1 | gfm1 | ENSDARP00000070224 | ENSDARP00000087584 | Glutamyl-prolyl-tRNA synthetase. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | 0.830 |
| eprs1 | lrpprc | ENSDARP00000070224 | ENSDARP00000111776 | Glutamyl-prolyl-tRNA synthetase. | Leucine-rich pentatricopeptide repeat-containing. | 0.700 |
| eprs1 | mrps22 | ENSDARP00000070224 | ENSDARP00000027370 | Glutamyl-prolyl-tRNA synthetase. | Mitochondrial ribosomal protein S22. | 0.442 |
| fastkd3 | gfm1 | ENSDARP00000136191 | ENSDARP00000087584 | FAST kinase domains 3. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | 0.828 |
| fastkd3 | lrpprc | ENSDARP00000136191 | ENSDARP00000111776 | FAST kinase domains 3. | Leucine-rich pentatricopeptide repeat-containing. | 0.743 |
| fastkd3 | mrps22 | ENSDARP00000136191 | ENSDARP00000027370 | FAST kinase domains 3. | Mitochondrial ribosomal protein S22. | 0.832 |
| gfm1 | eprs1 | ENSDARP00000087584 | ENSDARP00000070224 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | Glutamyl-prolyl-tRNA synthetase. | 0.830 |
| gfm1 | fastkd3 | ENSDARP00000087584 | ENSDARP00000136191 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | FAST kinase domains 3. | 0.828 |
| gfm1 | lrpprc | ENSDARP00000087584 | ENSDARP00000111776 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | Leucine-rich pentatricopeptide repeat-containing. | 0.752 |
| gfm1 | mrps22 | ENSDARP00000087584 | ENSDARP00000027370 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | Mitochondrial ribosomal protein S22. | 0.909 |
| gfm1 | ptcd3 | ENSDARP00000087584 | ENSDARP00000135512 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that may have a role in mitochondrial translation; Belongs to the mitochondrion-specific ribosomal protein mS39 family. | 0.780 |
| lrpprc | LOC100534805 | ENSDARP00000111776 | ENSDARP00000140986 | Leucine-rich pentatricopeptide repeat-containing. | Translational activator of mitochondrially encoded cytochrome c oxidase I. | 0.734 |
| lrpprc | cox10 | ENSDARP00000111776 | ENSDARP00000048926 | Leucine-rich pentatricopeptide repeat-containing. | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | 0.662 |
| lrpprc | eprs1 | ENSDARP00000111776 | ENSDARP00000070224 | Leucine-rich pentatricopeptide repeat-containing. | Glutamyl-prolyl-tRNA synthetase. | 0.700 |
| lrpprc | fastkd3 | ENSDARP00000111776 | ENSDARP00000136191 | Leucine-rich pentatricopeptide repeat-containing. | FAST kinase domains 3. | 0.743 |
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