STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7FEX6_DANRESi:dkeyp-117b11.1. (406 aa)    
Predicted Functional Partners:
ENSDARP00000157146
Si:dkey-178e17.1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.999
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
      
 0.852
snap29
Synaptosome-associated protein 29.
      
 0.769
ap1s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.662
bard1
BRCA1-associated RING domain 1.
      
 0.451
E7F659_DANRE
Si:ch73-264p11.1.
      
 0.410
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.