STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9QER1_DANRESi:dkey-150i13.2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (294 aa)    
Predicted Functional Partners:
cpt2
Carnitine O-palmitoyltransferase 2, mitochondrial.
   
  
 0.732
aasdh
Beta-alanine-activating enzyme; Covalently binds beta-alanine in an ATP-dependent manner to form a thioester bond with its phosphopantetheine group and transfers it to an, as yet, unknown acceptor. May be required for a post- translational protein modification or for post-transcriptional modification of an RNA.
   
  
 0.607
zgc:154046
Zgc:154046; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.581
crata
Carnitine O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.581
cratb
Novel protein similar to vertebrate carnitine acetyltransferase (CRAT); Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.581
chata
Choline O-acetyltransferase; Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses. Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.580
pnpla8
Patatin-like phospholipase domain-containing 8.
 
      0.576
hsdl2
Hydroxysteroid dehydrogenase-like protein 2; Has apparently no steroid dehydrogenase activity. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.484
etfdh
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.461
acadm
Acyl-CoA dehydrogenase medium chain.
   
  
 0.441
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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