STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip4k2abPhosphatidylinositol-5-phosphate 4-kinase, type II, alpha b. (413 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 
 0.633
pi4kb
Phosphatidylinositol 4-kinase beta; Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol- 1,4,5,-trisphosphate (PIP).
   
 0.586
mrpl15
39S ribosomal protein L15, mitochondrial; Belongs to the universal ribosomal protein uL15 family.
  
  
 0.449
rpl32
Ribosomal protein L32.
  
    0.434
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
    0.434
gpsm1b
G protein-signaling modulator 1b.
   
 
 0.433
rpl19
60S ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
    0.424
gpsm2
G protein-signaling modulator 2.
    
 
 0.423
gpsm2l
G protein-signaling modulator 2,-like.
    
 
 0.423
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
  
 0.419
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.