STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc92Coiled-coil domain-containing 92. (349 aa)    
Predicted Functional Partners:
ccdc125
Coiled-coil domain-containing protein 125.
      
 0.857
psmd8
Proteasome 26S subunit, non-ATPase 8.
    
   0.851
ccdc96
Similar to coiled-coil domain containing 96.
      
 0.842
ccdc149a
Coiled-coil domain-containing protein 149-A; Belongs to the CCDC149 family.
      
 0.837
ccdc113
Coiled-coil domain-containing protein 113; May be involved in primary cilium formation.
      
 0.820
luzp1
Leucine zipper protein 1.
      
 0.745
bicdl1
BICD family-like cargo adapter 1; Component of secretory vesicle machinery in developing neurons that acts as a regulator of neurite outgrowth.
      
 0.704
adrm1
Proteasomal ubiquitin receptor ADRM1; Functions as a proteasomal ubiquitin receptor. Promotes the deubiquitinating activity associated with the 26S proteasome (By similarity); Belongs to the ADRM1 family.
    
   0.682
psmd10
Proteasome 26S subunit, non-ATPase, 10.
    
   0.665
bora
Protein aurora borealis; Required for the activation of aurka at the onset of mitosis.
      
 0.649
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.