Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F1QHX7_DANRE | jun | ENSDARP00000114903 | ENSDARP00000063911 | Si:dkey-151g10.3. | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.555 |
F1QHX7_DANRE | junba | ENSDARP00000114903 | ENSDARP00000109347 | Si:dkey-151g10.3. | JunB proto-oncogene, AP-1 transcription factor subunit a. | 0.555 |
F1QHX7_DANRE | junbb | ENSDARP00000114903 | ENSDARP00000131822 | Si:dkey-151g10.3. | JunB proto-oncogene, AP-1 transcription factor subunit b. | 0.555 |
F1QHX7_DANRE | jund | ENSDARP00000114903 | ENSDARP00000088526 | Si:dkey-151g10.3. | JunD proto-oncogene, AP-1 transcription factor subunit. | 0.555 |
F1QHX7_DANRE | june | ENSDARP00000114903 | ENSDARP00000135760 | Si:dkey-151g10.3. | JunE proto-oncogene, AP-1 transcription factor subunit. | 0.555 |
F1QHX7_DANRE | med14 | ENSDARP00000114903 | ENSDARP00000152971 | Si:dkey-151g10.3. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.612 |
F1QHX7_DANRE | med17 | ENSDARP00000114903 | ENSDARP00000023604 | Si:dkey-151g10.3. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.611 |
F1QHX7_DANRE | med7 | ENSDARP00000114903 | ENSDARP00000010075 | Si:dkey-151g10.3. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.600 |
F1QHX7_DANRE | pnpla8 | ENSDARP00000114903 | ENSDARP00000100874 | Si:dkey-151g10.3. | Patatin-like phospholipase domain-containing 8. | 0.642 |
F1QHX7_DANRE | stk39 | ENSDARP00000114903 | ENSDARP00000110151 | Si:dkey-151g10.3. | Serine threonine kinase 39. | 0.756 |
jun | F1QHX7_DANRE | ENSDARP00000063911 | ENSDARP00000114903 | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | Si:dkey-151g10.3. | 0.555 |
jun | junba | ENSDARP00000063911 | ENSDARP00000109347 | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | JunB proto-oncogene, AP-1 transcription factor subunit a. | 0.828 |
jun | junbb | ENSDARP00000063911 | ENSDARP00000131822 | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | JunB proto-oncogene, AP-1 transcription factor subunit b. | 0.712 |
jun | jund | ENSDARP00000063911 | ENSDARP00000088526 | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | JunD proto-oncogene, AP-1 transcription factor subunit. | 0.923 |
junba | F1QHX7_DANRE | ENSDARP00000109347 | ENSDARP00000114903 | JunB proto-oncogene, AP-1 transcription factor subunit a. | Si:dkey-151g10.3. | 0.555 |
junba | jun | ENSDARP00000109347 | ENSDARP00000063911 | JunB proto-oncogene, AP-1 transcription factor subunit a. | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.828 |
junba | junbb | ENSDARP00000109347 | ENSDARP00000131822 | JunB proto-oncogene, AP-1 transcription factor subunit a. | JunB proto-oncogene, AP-1 transcription factor subunit b. | 0.580 |
junba | jund | ENSDARP00000109347 | ENSDARP00000088526 | JunB proto-oncogene, AP-1 transcription factor subunit a. | JunD proto-oncogene, AP-1 transcription factor subunit. | 0.820 |
junba | june | ENSDARP00000109347 | ENSDARP00000135760 | JunB proto-oncogene, AP-1 transcription factor subunit a. | JunE proto-oncogene, AP-1 transcription factor subunit. | 0.634 |
junbb | F1QHX7_DANRE | ENSDARP00000131822 | ENSDARP00000114903 | JunB proto-oncogene, AP-1 transcription factor subunit b. | Si:dkey-151g10.3. | 0.555 |
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