STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccl19bChemokine (C-C motif) ligand 19b. (128 aa)    
Predicted Functional Partners:
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
   
 0.999
cxcl12a
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.947
ackr4b
Atypical chemokine receptor 4b; Belongs to the G-protein coupled receptor 1 family.
   
 0.927
ackr4a
Atypical chemokine receptor 4a; Belongs to the G-protein coupled receptor 1 family.
   
 0.926
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
    
 0.921
ccl25b
Chemokine (C-C motif) ligand 25b.
   
 
 0.912
ccr9a
Chemokine (C-C motif) receptor 9a; Belongs to the G-protein coupled receptor 1 family.
   
 0.902
cxcr1
Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.889
cxcr2
Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.860
ccl20b
C-C motif chemokine.
   
 
 0.840
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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