Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A2BFP7_DANRE | cul5a | ENSDARP00000115113 | ENSDARP00000100474 | RBR-type E3 ubiquitin transferase. | Cullin 5a; Belongs to the cullin family. | 0.409 |
A2BFP7_DANRE | cul5b | ENSDARP00000115113 | ENSDARP00000109586 | RBR-type E3 ubiquitin transferase. | Cullin 5b; Belongs to the cullin family. | 0.409 |
A2BFP7_DANRE | ikbkg | ENSDARP00000115113 | ENSDARP00000027612 | RBR-type E3 ubiquitin transferase. | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | 0.450 |
A2BFP7_DANRE | tnfb | ENSDARP00000115113 | ENSDARP00000010728 | RBR-type E3 ubiquitin transferase. | Tumor necrosis factor b (TNF superfamily, member 2). | 0.506 |
cul5a | A2BFP7_DANRE | ENSDARP00000100474 | ENSDARP00000115113 | Cullin 5a; Belongs to the cullin family. | RBR-type E3 ubiquitin transferase. | 0.409 |
cul5a | cul5b | ENSDARP00000100474 | ENSDARP00000109586 | Cullin 5a; Belongs to the cullin family. | Cullin 5b; Belongs to the cullin family. | 0.900 |
cul5b | A2BFP7_DANRE | ENSDARP00000109586 | ENSDARP00000115113 | Cullin 5b; Belongs to the cullin family. | RBR-type E3 ubiquitin transferase. | 0.409 |
cul5b | cul5a | ENSDARP00000109586 | ENSDARP00000100474 | Cullin 5b; Belongs to the cullin family. | Cullin 5a; Belongs to the cullin family. | 0.900 |
ikbkg | A2BFP7_DANRE | ENSDARP00000027612 | ENSDARP00000115113 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | RBR-type E3 ubiquitin transferase. | 0.450 |
ikbkg | tnfb | ENSDARP00000027612 | ENSDARP00000010728 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Tumor necrosis factor b (TNF superfamily, member 2). | 0.932 |
tnfb | A2BFP7_DANRE | ENSDARP00000010728 | ENSDARP00000115113 | Tumor necrosis factor b (TNF superfamily, member 2). | RBR-type E3 ubiquitin transferase. | 0.506 |
tnfb | ikbkg | ENSDARP00000010728 | ENSDARP00000027612 | Tumor necrosis factor b (TNF superfamily, member 2). | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | 0.932 |