STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grik1aGlutamate receptor, ionotropic, kainate 1a. (904 aa)    
Predicted Functional Partners:
KCNV1
Si:dkey-201i6.2; Belongs to the potassium channel family.
   
  
 0.747
tubgcp5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.653
GRM7
Glutamate metabotropic receptor 7.
      
 0.635
grm3
Novel protein similar to vertebrate glutamate receptor, metabotropic 3 (GRM3).
   
  
 0.607
nipa2
Non imprinted in Prader-Willi/Angelman syndrome 2 (Human).
      
 0.589
neto2b
Neuropilin (NRP) and tolloid (TLL)-like 2b.
   
 
 0.575
grik4
Glutamate receptor, ionotropic, kainate 4.
  
 
0.573
grik5
Glutamate receptor, ionotropic, kainate 5.
  
 
 
0.569
si:dkey-1h24.2
Si:dkey-1h24.2; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.561
grm4
Glutamate receptor, metabotropic 4.
   
  
 0.559
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.