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bbip1 protein (Danio rerio) - STRING interaction network
"bbip1" - BBSome-interacting protein 1 in Danio rerio
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
bbip1BBSome-interacting protein 1; Required for primary cilia assembly; Belongs to the BBIP10 family (72 aa)    
Predicted Functional Partners:
bbs5
Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis (342 aa)
     
 
  0.922
bbs2
Bardet-Biedl syndrome 2 protein homolog; Required for ciliogenesis (715 aa)
         
  0.917
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function (715 aa)
           
  0.844
bbs1
Bardet-Biedl syndrome 1 (588 aa)
           
  0.829
bbs9
Bardet-Biedl syndrome 9 (877 aa)
           
  0.828
bbs12
Bardet-Biedl syndrome 12 (764 aa)
           
  0.794
lztfl1
Leucine zipper transcription factor-like 1 (298 aa)
           
  0.780
bbs10
Bardet-Biedl syndrome 10; Belongs to the TCP-1 chaperonin family (567 aa)
           
  0.746
ENSDARG00000074958
Si-zfos-169g10.2; Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family (425 aa)
           
  0.686
sstr3
Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family (480 aa)
           
  0.641
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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