STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wsb2WD repeat and SOCS box-containing 2. (406 aa)    
Predicted Functional Partners:
ash2l
Ash2-like, histone lysine methyltransferase complex subunit.
   
 
 0.797
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 
 0.750
cul5a
Cullin 5a; Belongs to the cullin family.
    
 0.728
rbbp5
Retinoblastoma-binding protein 5.
   
 
 0.719
wdr82
WD repeat-containing protein 82; Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus; Belongs to the WD repeat SWD2 family.
  
 
0.656
eloca
Elongin C paralog a; Belongs to the SKP1 family.
   
 0.651
elocb
Elongin C paralog b; Belongs to the SKP1 family.
   
 0.651
kat14
Lysine acetyltransferase 14.
    
 
 0.638
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.635
rnf7
Ring finger protein 7.
    
 0.624
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.