STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
si:dkey-28d5.3Si:dkey-28d5.3. (381 aa)    
Predicted Functional Partners:
mst1rb
Macrophage-stimulating 1 receptor b.
    
 
 0.860
il17rel
Interleukin 17 receptor E-like.
      
 0.831
mst1ra
Macrophage-stimulating 1 receptor a.
    
 
 0.743
serbp1a
SERPINE1 mRNA-binding protein 1a.
      
 0.742
cnbpb
CCHC-type zinc finger, nucleic acid-binding protein b.
    
 
 0.567
bsg
Basigin.
    
 
 0.557
cnbpa
CCHC-type zinc finger, nucleic acid-binding protein a.
    
 
 0.557
lrp1aa
Low density lipoprotein receptor-related protein 1Aa.
      
 0.551
tgm2l
Transglutaminase 2,-like.
    
 
 0.545
saal1
Protein saal1; Plays a role in promoting cell proliferation in response to proinflammatory stimuli; Belongs to the SAAL1 family.
      
 0.542
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.