STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tgm2lTransglutaminase 2,-like. (692 aa)    
Predicted Functional Partners:
lrp1aa
Low density lipoprotein receptor-related protein 1Aa.
   
  
 0.807
saal1
Protein saal1; Plays a role in promoting cell proliferation in response to proinflammatory stimuli; Belongs to the SAAL1 family.
      
 0.801
zp2.5
Zona pellucida glycoprotein 2, tandem duplicate 5.
    
 
 0.750
zp3a.2
Zona pellucida glycoprotein 3a, tandem duplicate 2.
      
 0.669
nosip
Nitric oxide synthase-interacting protein; E3 ubiquitin-protein ligase that is essential for proper development of the forebrain, the eye, and the face (By similarity). Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity (By similarity).
   
  
 0.652
F1RCZ8_DANRE
Si:dkey-11o15.7.
    
 
 0.545
E9QB32_DANRE
Si:dkey-28d5.11.
    
 
 0.545
A5WUI8_DANRE
Si:dkey-83f18.8.
    
 
 0.545
si:dkey-28d5.3
Si:dkey-28d5.3.
    
 
 0.545
F1QC82_DANRE
Si:dkey-28d5.14.
    
 
 0.545
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.