STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rgl1Ral guanine nucleotide dissociation stimulator-like 1; Probable guanine nucleotide exchange factor. (804 aa)    
Predicted Functional Partners:
LOC101883528
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.836
LOC565819
Si:ch211-13k12.2.
   
  
 0.808
hsd11b1lb
Hydroxysteroid (11-beta) dehydrogenase 1-like b.
      
 0.807
hrasb
-Ha-ras Harvey rat sarcoma viral oncogene homolog, like.
   
 0.754
nras
GTPase NRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity; Belongs to the small GTPase superfamily. Ras family.
   
 0.754
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.754
pxk
PX domain-containing serine/threonine kinase.
   
  
 0.744
micos13
MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. Constituent of mature MICOS complex, it is required for the formation of cristae junction (CJ) and maintenance of cristae morphology. Required for the incorporation of MIC10 into the MICOS complex.
      
 0.691
ppp2r5d
Protein phosphatase 2, regulatory subunit B', delta.
      
 0.613
ceacam1
CEA cell adhesion molecule 1.
      
 0.605
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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