STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps36Mitochondrial ribosomal protein S36. (113 aa)    
Predicted Functional Partners:
mrps27
Mitochondrial ribosomal protein S27.
   
 
 0.959
mrps15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 0.944
mrps21
Mitochondrial ribosomal protein S21.
   
 0.941
mrps23
Mitochondrial ribosomal protein S23.
   
 
 0.918
ptcd3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that may have a role in mitochondrial translation; Belongs to the mitochondrion-specific ribosomal protein mS39 family.
   
 
 0.884
mrps30
Mitochondrial ribosomal protein S30.
   
 0.878
mrps35
28S ribosomal protein S35, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS35 family.
   
 
 0.875
mrps10
Probable 28S ribosomal protein S10, mitochondrial; Belongs to the universal ribosomal protein uS10 family.
   
 
 0.873
dap3
Death-associated protein 3.
   
 0.870
mrps33
Mitochondrial ribosomal protein S33.
   
 0.852
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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