STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nectin3bNectin-3-like protein; May play a role in cell-cell adhesion; Belongs to the nectin family. (574 aa)    
Predicted Functional Partners:
E7F6D0_DANRE
Si:ch73-22o12.1.
    
0.971
afdna
Afadin, adherens junction formation factor a.
    
 0.969
nectin1b
Nectin cell adhesion molecule 1b.
   
0.960
nectin1a
Nectin cell adhesion molecule 1a.
    
0.960
pvrl2l
PVR cell adhesion molecule-related 2-like.
    
0.925
cadm1b
Cell adhesion molecule 1b.
    
0.919
cadm3
Cell adhesion molecule 3.
    
 
0.910
pard3ab
Par-3 family cell polarity regulator alpha, b.
   
 0.910
PARD3
Par-3 family cell polarity regulator.
   
 0.910
nectin3a
Uncharacterized protein.
  
  
 
0.903
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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