STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1QT78_DANRESi:ch211-191d15.2. (221 aa)    
Predicted Functional Partners:
kng1
Kininogen 1.
      
 0.807
apobb.1
Apolipoprotein Bb, tandem duplicate 1.
    
 
 0.732
fga
Fibrinogen alpha chain.
      
 0.661
apobb.2
Apolipoprotein Bb, tandem duplicate 2.
    
 
 0.651
apoa1a
Proapolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT).
   
  
 0.572
X1WF86_DANRE
Si:dkey-52d15.2.
      
 0.564
serpinc1
Serine (Or cysteine) proteinase inhibitor, clade C (Antithrombin), member 1; Belongs to the serpin family.
      
 0.561
zgc:171776
Zgc:171776.
    
   0.480
adgrl2b.1
Adhesion G protein-coupled receptor L2b, tandem duplicate 1.
    
   0.480
zgc:171781
Zgc:171781.
    
   0.480
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.