STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad21bRAD21 cohesin complex component b. (637 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.984
espl1
Extra spindle pole bodies-like 1, separase.
   
 0.969
smc1a
Structural maintenance of chromosomes protein.
   
 0.958
smc1al
Structural maintenance of chromosomes protein.
   
 0.958
smc1b
Structural maintenance of chromosomes protein.
   
 0.958
stag2a
Stromal antigen 2a.
   
 0.932
stag1a
Stromal antigen 1a.
   
 0.932
B0S5T4_DANRE
Si:ch211-269e2.1.
   
 0.932
stag1b
Stromal antigen 1b.
   
 0.932
stag2b
Stromal antigen 2b.
   
 0.932
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.