STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf367Zinc finger protein 367; Transcriptional activator; Belongs to the krueppel C2H2-type zinc-finger protein family. (316 aa)    
Predicted Functional Partners:
lzts3b
Leucine zipper, putative tumor suppressor family member 3b.
      
 0.871
thnsl2
Threonine synthase-like 2; Acts as a catabolic phospho-lyase on both gamma- and beta- phosphorylated substrates. Degrades O-phospho-threonine (PThr) to alpha-ketobutyrate, ammonia and phosphate (By similarity). Belongs to the threonine synthase family.
      
 0.842
krcp
Kelch repeat-containing protein.
   
 
 0.832
ubox5
U-box domain-containing 5.
      
 0.801
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
      
 0.794
scml4
Scm polycomb group protein-like 4.
    
 
 0.761
ddrgk1
DDRGK domain-containing protein 1; By regulating the post-translational modification of specific proteins, may play a role in different cellular process (By similarity). Plays a role in cartilage development through SOX9, inhibiting the ubiquitin-mediated proteasomal degradation of this transcriptional regulator.
      
 0.732
mex3a
RING-type domain-containing protein.
      
 0.670
zfand3
Zinc finger, AN1-type domain 3.
      
 0.668
ap5s1
Adaptor-related protein complex 5 subunit sigma 1.
      
 0.629
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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