STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R4GDR9_DANRESi:ch211-131k2.2. (132 aa)    
Predicted Functional Partners:
gdpd5a
Glycerophosphodiester phosphodiesterase domain-containing 5a.
      
 0.897
slc25a18
Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.832
ckmt1
Creatine kinase, mitochondrial 1; Belongs to the ATP:guanido phosphotransferase family.
      
 0.807
nkx6.2
NK6 homeobox 2.
      
 0.716
ptgdsb.1
Lipocalin-type prostaglandin D synthase-like protein; Belongs to the calycin superfamily. Lipocalin family.
  
   
 0.600
inhbaa
Inhibin subunit beta Aa.
      
 0.556
pmchl
Pro-melanin concentrating hormone-like protein.
      
 0.479
gabbr1b
Gamma-aminobutyric acid (GABA) B receptor, 1b.
      
 0.478
igf1
Insulin-like growth factor 1b.
      
 0.453
gabbr1a
Gamma-aminobutyric acid (GABA) B receptor, 1a.
      
 0.400
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.